info.bioinfweb.treegraph.document.io.newick
Class NewickScanner

java.lang.Object
  info.bioinfweb.treegraph.document.io.newick.NewickStringChars
      info.bioinfweb.treegraph.document.io.newick.NewickScanner

public class NewickScanner
extends NewickStringChars

Field Summary

Fields inherited from class info.bioinfweb.treegraph.document.io.newick.NewickStringChars

COMMENT_END, COMMENT_START, ELEMENT_SEPERATOR, FREE_NAME_BLANK, LENGTH_SEPERATOR, NAME_DELIMITER, SUBTREE_END, SUBTREE_START, TERMINAL_SYMBOL

Constructor Summary

NewickScanner()

Method Summary

static java.util.Vector<NewickToken>	parse(java.lang.String text)
private static int	readBranchLength(NewickToken token, java.lang.String text, int start) Reads a length statement in an Newick string.
private static int	readDelimitedName(java.lang.String text, int start, NewickToken token)
private static NewickToken	readFreeName(java.lang.String text, int start)

Methods inherited from class info.bioinfweb.treegraph.document.io.newick.NewickStringChars

isCharAfterLength, isFreeNameChar, isFreeNameFirstChar

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

NewickScanner

public NewickScanner()

Method Detail

readFreeName

private static NewickToken readFreeName(java.lang.String text,
                                        int start)

readDelimitedName

private static int readDelimitedName(java.lang.String text,
                                     int start,
                                     NewickToken token)

readBranchLength

private static int readBranchLength(NewickToken token,
                                    java.lang.String text,
                                    int start)

Reads a length statement in an Newick string.

Parameters:

token - the token where the length value shall be stored

text - the Newick string

start - ste start position of the length statement

Returns:

the position to go on tokenizing

parse

public static java.util.Vector<NewickToken> parse(java.lang.String text)