Package info.bioinfweb.treegraph.document

Contains the classes that represent the data structure of TreeGraph 2 (document elements and formats) as well as all edit operations in the undo-package to manipulate the data structure and classes to read and write a document from and to different formats (io- subpackage).

See:
Description

Interface Summary

DocumentView
EdgeRadiusElement
HiddenDataElement
LineElement
PaintableElement

Class Summary

Branch	The entity for a branch.
ConcretePaintableElement
ContrastManager	Ensures that document elements (that are e.g. pasted from the clipboard) have a sufficient contrast to the document background.
Document	Instances of this class contain the data for a tree and its formats as well as position-information for all TreePositioners used with this Document.
HiddenDataMap
IconLabel	This class represents an icon label in TreeGraph 2.
IDManager
Label	Label is the acestor of the two label classes TextLabel and CharacterShiftLabel.
LabelLine
Labels	This class stores the Labels of a Node and provides infomation about whole rows and columns.
Legend
LegendPositionData
Legends
Node	This class represents a node of a tree in the TreeGraph data structure.
NodeLadderizeComparable	This class is a wrapper class for Node-objects that allowws them to be compared by their number of terminal subnodes.
NodePositionData
PositionData
ScaleBar	This element represents a scale bar for the branch length values.
TextElement	This class can be used as the acestor of all classes that represent document elements which contain text or decimal values.
TextElementData	This class is used to store data of tree elements which can either be a string or a decimal value.
TextLabel
Tree	Intances of this class provide an enviroment for the rcursive data-structure of tree-elements without their formats.
TreePath	This class stores the path to an node from the root of the tree.
TreeSerializer

Enum Summary

ContrastManager.State

Package info.bioinfweb.treegraph.document Description

Contains the classes that represent the data structure of TreeGraph 2 (document elements and formats) as well as all edit operations in the undo-package to manipulate the data structure and classes to read and write a document from and to different formats (io- subpackage).