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## L

label - Variable in class info.bioinfweb.treegraph.document.clipboard.TreeClipboard
Label - Class in info.bioinfweb.treegraph.document
  Label is the acestor of the two label classes `TextLabel` and `CharacterShiftLabel`.
Label(Labels) - Constructor for class info.bioinfweb.treegraph.document.Label
label - Variable in class info.bioinfweb.treegraph.document.undo.edit.InsertRemoveLabelEdit
label - Variable in class info.bioinfweb.treegraph.document.undo.edit.PasteLabelEdit
LABEL_DISTANCE - Static variable in class info.bioinfweb.treegraph.gui.treeframe.ruler.TreeViewRuler
  The distance of the labels to the border of the component
LABEL_LENGTH_STANDARD - Static variable in class info.bioinfweb.treegraph.gui.treeframe.ruler.TreeViewRuler
  This string is used to test if the interval between two main dashes is smaller than the usual label text.
LabelAboveOperator - Class in info.bioinfweb.treegraph.document.format.operate
LabelAboveOperator(boolean) - Constructor for class info.bioinfweb.treegraph.document.format.operate.LabelAboveOperator
LabelAdapter - Class in info.bioinfweb.treegraph.document.nodedata
LabelAdapter(String, DecimalFormat) - Constructor for class info.bioinfweb.treegraph.document.nodedata.LabelAdapter
labelBlockDistance - Variable in class info.bioinfweb.treegraph.document.format.GlobalFormats
labelBlockDistanceInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.GlobalFormatsDialog
labelBlockMargin - Variable in class info.bioinfweb.treegraph.document.format.GlobalFormats
labelBlockMarginInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.GlobalFormatsDialog
labelCount(boolean, int) - Method in class info.bioinfweb.treegraph.document.Labels
  Returns the number of labels in the specified line.
labelFormats - Variable in class info.bioinfweb.treegraph.document.io.tgf.TGFReader
LabelIcon - Interface in info.bioinfweb.treegraph.document.labelicons
LabelIconType - Enum in info.bioinfweb.treegraph.document.labelicons
  Lists all types of label icons.
LabelIconType() - Constructor for enum info.bioinfweb.treegraph.document.labelicons.LabelIconType
LabelIDComboBox - Class in info.bioinfweb.treegraph.gui.dialogs
LabelIDComboBox() - Constructor for class info.bioinfweb.treegraph.gui.dialogs.LabelIDComboBox
labelIDLabel - Variable in class info.bioinfweb.treegraph.gui.dialogs.datatable.CopyNodeDataDialog
labelIDPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.datatable.RenameIDDialog
labelingPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.ScaleBarPanel
LabelLine - Class in info.bioinfweb.treegraph.document
LabelLine() - Constructor for class info.bioinfweb.treegraph.document.LabelLine
LabelLineNumberOperator - Class in info.bioinfweb.treegraph.document.format.operate
LabelLineNumberOperator(int) - Constructor for class info.bioinfweb.treegraph.document.format.operate.LabelLineNumberOperator
LabelLinePositionOperator - Class in info.bioinfweb.treegraph.document.format.operate
LabelLinePositionOperator(int) - Constructor for class info.bioinfweb.treegraph.document.format.operate.LabelLinePositionOperator
labelLinesAbove - Variable in class info.bioinfweb.treegraph.document.Labels
labelLinesBelow - Variable in class info.bioinfweb.treegraph.document.Labels
labelList - Variable in class info.bioinfweb.treegraph.document.clipboard.TreeClipboard
labelList - Variable in class info.bioinfweb.treegraph.document.undo.edit.PasteAllLabelsEdit
labelNumbersPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel
LabelPanel - Class in info.bioinfweb.treegraph.gui.dialogs.elementformats
LabelPanel() - Constructor for class info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel
  This is the default constructor
LabelPositionFormats - Class in info.bioinfweb.treegraph.document.format
  This class implements the formats necessary to position an label relative to others.
LabelPositionFormats(Label) - Constructor for class info.bioinfweb.treegraph.document.format.LabelPositionFormats
LabelPositionFormats(Label, boolean, int, int) - Constructor for class info.bioinfweb.treegraph.document.format.LabelPositionFormats
labelRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.AddSupportValuesDialog
labels - Variable in class info.bioinfweb.treegraph.document.Branch
labels - Variable in class info.bioinfweb.treegraph.document.Label
Labels - Class in info.bioinfweb.treegraph.document
  This class stores the Labels of a Node and provides infomation about whole rows and columns.
Labels(Branch) - Constructor for class info.bioinfweb.treegraph.document.Labels
labels - Variable in class info.bioinfweb.treegraph.document.undo.edit.ChangeLabelIDEdit
LabelTextColorAdapter - Class in info.bioinfweb.treegraph.gui.dialogs.formatbynodedata.coloradapters
LabelTextColorAdapter(String) - Constructor for class info.bioinfweb.treegraph.gui.dialogs.formatbynodedata.coloradapters.LabelTextColorAdapter
LabelTextHeightAdapter - Class in info.bioinfweb.treegraph.gui.dialogs.formatbynodedata.distanceadapters
LabelTextHeightAdapter(String) - Constructor for class info.bioinfweb.treegraph.gui.dialogs.formatbynodedata.distanceadapters.LabelTextHeightAdapter
ladderize(Node, boolean) - Method in class info.bioinfweb.treegraph.document.undo.edit.LadderizeEdit
LadderizeAction - Class in info.bioinfweb.treegraph.gui.actions.edit
LadderizeAction(MainFrame, boolean) - Constructor for class info.bioinfweb.treegraph.gui.actions.edit.LadderizeAction
ladderizeDown - Variable in class info.bioinfweb.treegraph.document.NodeLadderizeComparable
LadderizeDownAction - Class in info.bioinfweb.treegraph.gui.actions.edit
LadderizeDownAction(MainFrame) - Constructor for class info.bioinfweb.treegraph.gui.actions.edit.LadderizeDownAction
LadderizeEdit - Class in info.bioinfweb.treegraph.document.undo.edit
  This class ladderized a subtree.
LadderizeEdit(Document, Node, boolean) - Constructor for class info.bioinfweb.treegraph.document.undo.edit.LadderizeEdit
LadderizeUpAction - Class in info.bioinfweb.treegraph.gui.actions.edit
LadderizeUpAction(MainFrame) - Constructor for class info.bioinfweb.treegraph.gui.actions.edit.LadderizeUpAction
lastSelection - Variable in class info.bioinfweb.treegraph.gui.dialogs.exporttographic.ExportToGraphicDialog
  Used to convert the width and height values if their unit is changed by the user.
LEAF_ADAPTER - Static variable in class info.bioinfweb.treegraph.document.io.newick.NewickStringReader
leafFormats - Variable in class info.bioinfweb.treegraph.document.io.tgf.TGFReader
leafInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.ExportToNewickStringDialog
leafLabel - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.ExportToNewickStringDialog
leafMargin - Variable in class info.bioinfweb.treegraph.document.format.GlobalFormats
leafMarginInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.GlobalFormatsDialog
leafNames() - Method in class info.bioinfweb.treegraph.document.Node
left - Variable in class info.bioinfweb.treegraph.document.format.Margin
left - Variable in class info.bioinfweb.treegraph.document.PositionData
left - Variable in class info.bioinfweb.treegraph.gui.dialogs.MarginInput
leftRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.ScaleBarPanel
legend - Variable in class info.bioinfweb.treegraph.document.clipboard.TreeClipboard
Legend - Class in info.bioinfweb.treegraph.document
Legend(Legends) - Constructor for class info.bioinfweb.treegraph.document.Legend
legend - Variable in class info.bioinfweb.treegraph.document.undo.edit.InsertRemoveLegendEdit
legend - Variable in class info.bioinfweb.treegraph.document.undo.edit.PasteLegendEdit
legend - Variable in class info.bioinfweb.treegraph.document.undo.format.ReanchorLegendEdit
LegendFormats - Class in info.bioinfweb.treegraph.document.format
LegendFormats(Legend) - Constructor for class info.bioinfweb.treegraph.document.format.LegendFormats
legendMargin - Variable in class info.bioinfweb.treegraph.document.format.GlobalFormats
legendMarginInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.GlobalFormatsDialog
legendNumbersPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel
legendOrderLabel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel
legendOrientationPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel
LegendPanel - Class in info.bioinfweb.treegraph.gui.dialogs.elementformats
LegendPanel() - Constructor for class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel
  This is the default constructor
legendPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.GlobalFormatsDialog
LegendPositionData - Class in info.bioinfweb.treegraph.document
LegendPositionData() - Constructor for class info.bioinfweb.treegraph.document.LegendPositionData
legendPositionMonitor - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel
LegendPositionOperator - Class in info.bioinfweb.treegraph.document.format.operate
LegendPositionOperator(int) - Constructor for class info.bioinfweb.treegraph.document.format.operate.LegendPositionOperator
legendPositionTextField - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel
legendPresent - Variable in class info.bioinfweb.treegraph.gui.treeframe.TreeSelection
legends - Variable in class info.bioinfweb.treegraph.document.Legend
Legends - Class in info.bioinfweb.treegraph.document
Legends(Tree) - Constructor for class info.bioinfweb.treegraph.document.Legends
legends - Variable in class info.bioinfweb.treegraph.document.Tree
legendSpacing - Variable in class info.bioinfweb.treegraph.document.format.GlobalFormats
legendSpacingInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.GlobalFormatsDialog
legendsReanchored - Variable in class info.bioinfweb.treegraph.document.undo.SaveLegendsEdit
legendsRemoved - Variable in class info.bioinfweb.treegraph.document.undo.SaveLegendsEdit
legendsSave - Variable in class info.bioinfweb.treegraph.document.undo.SaveLegendsEdit
legendStyle - Variable in class info.bioinfweb.treegraph.document.format.LegendFormats
LegendStyle - Enum in info.bioinfweb.treegraph.document.format
LegendStyle() - Constructor for enum info.bioinfweb.treegraph.document.format.LegendStyle
LegendStyleOperator - Class in info.bioinfweb.treegraph.document.format.operate
LegendStyleOperator(LegendStyle) - Constructor for class info.bioinfweb.treegraph.document.format.operate.LegendStyleOperator
legendStylePanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel
length - Variable in class info.bioinfweb.treegraph.document.Branch
length - Variable in class info.bioinfweb.treegraph.document.format.operate.MinLengthOperator
length - Variable in class info.bioinfweb.treegraph.document.io.newick.NewickToken
LENGTH_SEPERATOR - Static variable in class info.bioinfweb.treegraph.document.io.newick.NewickStringChars
lengthInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.ScaleBranchLengthsDialog
lengthPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.ScaleBranchLengthsDialog
licenceLabel - Variable in class info.bioinfweb.treegraph.gui.dialogs.AboutDialog
line - Variable in class info.bioinfweb.treegraph.document.LabelLine
lineColor - Variable in class info.bioinfweb.treegraph.document.format.BranchFormats
lineColor - Variable in class info.bioinfweb.treegraph.document.format.LegendFormats
lineColor - Variable in class info.bioinfweb.treegraph.document.format.LineFormatsEntity
lineColor - Variable in class info.bioinfweb.treegraph.document.format.NodeFormats
lineColor - Variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats
LineColorOperator - Class in info.bioinfweb.treegraph.document.format.operate
LineColorOperator(Color) - Constructor for class info.bioinfweb.treegraph.document.format.operate.LineColorOperator
lineColorPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LinePanel
lineCount(boolean) - Method in class info.bioinfweb.treegraph.document.Labels
lineDescent(boolean, int) - Method in class info.bioinfweb.treegraph.document.Labels
LineElement - Interface in info.bioinfweb.treegraph.document
LineFormats - Interface in info.bioinfweb.treegraph.document.format
LineFormatsEntity - Class in info.bioinfweb.treegraph.document.format
LineFormatsEntity() - Constructor for class info.bioinfweb.treegraph.document.format.LineFormatsEntity
lineHeight(PositionPaintType, boolean, int) - Method in class info.bioinfweb.treegraph.document.Labels
lineNoLabel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel
lineNoMonitor - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel
lineNoTextField - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel
lineNumber - Variable in class info.bioinfweb.treegraph.document.format.LabelPositionFormats
lineNumber - Variable in class info.bioinfweb.treegraph.document.format.operate.LabelLineNumberOperator
LinePanel - Class in info.bioinfweb.treegraph.gui.dialogs.elementformats
LinePanel() - Constructor for class info.bioinfweb.treegraph.gui.dialogs.elementformats.LinePanel
  This is the default constructor
linePosition - Variable in class info.bioinfweb.treegraph.document.format.LabelPositionFormats
linePosition - Variable in class info.bioinfweb.treegraph.document.format.operate.LabelLinePositionOperator
linePosLabel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel
linePosMonitor - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel
linePosTextField - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel
lineWidth - Variable in class info.bioinfweb.treegraph.document.format.BranchFormats
lineWidth - Variable in class info.bioinfweb.treegraph.document.format.LegendFormats
lineWidth - Variable in class info.bioinfweb.treegraph.document.format.LineFormatsEntity
lineWidth - Variable in class info.bioinfweb.treegraph.document.format.NodeFormats
lineWidth - Variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats
lineWidth - Variable in class info.bioinfweb.treegraph.document.io.tgf.TGFReader
lineWidth(PositionPaintType, boolean, int, float) - Method in class info.bioinfweb.treegraph.document.Labels
  Returns the width of the specified line
lineWidthInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LinePanel
LineWidthOperator - Class in info.bioinfweb.treegraph.document.format.operate
LineWidthOperator(DistanceValue) - Constructor for class info.bioinfweb.treegraph.document.format.operate.LineWidthOperator
list - Variable in class info.bioinfweb.treegraph.document.Legends
list - Variable in class info.bioinfweb.treegraph.document.undo.edit.AddSupportValuesEdit.LeafList
loadIcons() - Method in class info.bioinfweb.treegraph.gui.mainframe.MainFrame
loadNameTable(File, Vector<String>, Vector<String>, char) - Static method in class info.bioinfweb.treegraph.document.undo.edit.ApplyNameTableEdit
loadNameTable(InputStream, Vector<String>, Vector<String>, char) - Static method in class info.bioinfweb.treegraph.document.undo.edit.ApplyNameTableEdit
loadSymbols(String) - Method in class info.bioinfweb.treegraph.gui.actions.TreeGraphAction
  Loads the small and large icon for this action from /resources/symbols/ in the the JAR file.
locale - Variable in class info.bioinfweb.treegraph.document.format.operate.DecimalFormatOperator
locale - Variable in class info.bioinfweb.treegraph.document.format.TextFormats
localeComboBox - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.DecimalFormatPanel
localeLabel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.DecimalFormatPanel
LogCalculator - Class in info.bioinfweb.treegraph.gui.dialogs.datatable.math
LogCalculator(double) - Constructor for class info.bioinfweb.treegraph.gui.dialogs.datatable.math.LogCalculator
logValuesButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.datatable.DataTableDialog
longestPath(Node, boolean) - Static method in class info.bioinfweb.treegraph.document.Tree
  Returns the longest path to a terminal in the subtree of `root`.
longestPath() - Method in class info.bioinfweb.treegraph.document.Tree
  /** Returns the longest path to a terminal in this tree.
longInterval - Variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats
longIntervalInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.ScaleBarPanel
lowerInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.datatable.IntervalDialog
lowerToolBar - Variable in class info.bioinfweb.treegraph.gui.mainframe.ToolBarPanel

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