Uses of Class
info.bioinfweb.treegraph.document.io.newick.NewickException

Packages that use NewickException

info.bioinfweb.treegraph.document.io.newick

Uses of NewickException in info.bioinfweb.treegraph.document.io.newick

Methods in info.bioinfweb.treegraph.document.io.newick that return NewickException

static NewickException

NewickException.getUnterminedNameException(int start)

Methods in info.bioinfweb.treegraph.document.io.newick that throw NewickException

static Tree	NewickStringReader.read(String newick)
static Tree	NewickStringReader.read(String newick, NodeDataAdapter internalAdapter, NodeDataAdapter branchLengthsAdapter)
static Tree	NewickStringReader.read(String newick, NodeDataAdapter internalAdapter, NodeDataAdapter branchLengthsAdapter, TranslTable translTable, boolean translateInternals)
private static Node	NewickStringReader.readBranch(Vector<NewickToken> tokens, int start, int end, Node root, NodeDataAdapter internalAdapter, NodeDataAdapter branchLengthAdapter, TranslTable translTable, boolean translateInternals)
private static void	NewickStringReader.readBranchList(Vector<NewickToken> tokens, int start, int end, Node root, NodeDataAdapter internalAdapter, NodeDataAdapter branchLengthAdapter, TranslTable translTable, boolean translateInternals)
private static Node	NewickStringReader.readInternal(Vector<NewickToken> tokens, int start, int end, NodeDataAdapter internalAdapter, NodeDataAdapter branchLengthAdapter, TranslTable translTable, boolean translateInternals)
private static Node	NewickStringReader.readLeaf(Vector<NewickToken> tokens, int start, int end, TranslTable translTable)
private static void	NewickStringReader.readName(Vector<NewickToken> tokens, int previousEnd, int end, Node root, NodeDataAdapter internalAdapter, TranslTable translTable)
private static Node	NewickStringReader.readSubtree(Vector<NewickToken> tokens, int start, int end, NodeDataAdapter internalAdapter, NodeDataAdapter branchLengthAdapter, TranslTable translTable, boolean translateInternals)
private static Tree	NewickStringReader.readTree(Vector<NewickToken> tokens, NodeDataAdapter internalAdapter, NodeDataAdapter branchLengthsAdapter, TranslTable translTable, boolean translateInternals)