| Methods in info.bioinfweb.treegraph.document.io.newick that throw NewickException |
Tree |
NewickStringReader.read(String newick)
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Tree |
NewickStringReader.read(String newick,
NodeBranchDataAdapter internalAdapter,
NodeBranchDataAdapter branchLengthsAdapter)
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Tree |
NewickStringReader.read(String newick,
NodeBranchDataAdapter internalAdapter,
NodeBranchDataAdapter branchLengthsAdapter,
TranslTable translTable,
boolean translateInternals)
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private Node |
NewickStringReader.readBranch(int start,
int end,
Node root)
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private void |
NewickStringReader.readBranchList(int start,
int end,
Node root)
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private Node |
NewickStringReader.readInternal(int start,
int end)
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private Node |
NewickStringReader.readLeaf(int start,
int end)
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private void |
NewickStringReader.readName(int previousEnd,
int end,
Node root,
NodeBranchDataAdapter adapter,
TranslTable translTable)
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private Node |
NewickStringReader.readSubtree(int start,
int end)
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private Tree |
NewickStringReader.readTree()
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