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## B

backgroundColor - Variable in class info.bioinfweb.treegraph.document.format.GlobalFormats
backup - Variable in class info.bioinfweb.treegraph.document.undo.NodeBranchDataEdit
backupFormats() - Method in class info.bioinfweb.treegraph.document.undo.format.AutoPositionLabelsEdit
backups - Variable in class info.bioinfweb.treegraph.document.undo.file.ImportTableEdit
backupSubtree(Node) - Method in class info.bioinfweb.treegraph.document.undo.NodeBranchDataBackup
batikLabel - Variable in class info.bioinfweb.treegraph.gui.dialogs.AboutDialog
beginningRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.ReplaceInNodeDataDialog
belowRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel
bestQualityLabel - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.exporttographic.JPEGPrefPanel
BG_COLOR - Static variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.IconPreviewPanel
BLOCK_BEGIN_PATTERN - Static variable in class info.bioinfweb.treegraph.document.io.nexus.NexusParser
BLOCK_END_PATTERN - Static variable in class info.bioinfweb.treegraph.document.io.nexus.NexusParser
blueFactor - Variable in class info.bioinfweb.treegraph.document.undo.format.ColorsByNodeBranchDataEdit
BOLD - Static variable in interface info.bioinfweb.treegraph.document.format.TextFormats
boldCheckBox - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.FontFormatsPanel
boldMonitor - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.FontFormatsPanel
bothRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.ExportTableDialog
bottom - Variable in class info.bioinfweb.treegraph.document.format.Margin
bottom - Variable in class info.bioinfweb.treegraph.gui.dialogs.MarginInput
braceRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel
bracketRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel
Branch - Class in info.bioinfweb.treegraph.document
  The entity for a branch.
Branch(Node) - Constructor for class info.bioinfweb.treegraph.document.Branch
branch - Variable in class info.bioinfweb.treegraph.document.undo.edit.BranchLengthEdit
branch - Variable in class info.bioinfweb.treegraph.document.undo.edit.PasteAllLabelsEdit
branch - Variable in class info.bioinfweb.treegraph.document.undo.edit.PasteLabelEdit
branch - Variable in class info.bioinfweb.treegraph.document.undo.edit.SeparateBranchEdit
BRANCH_LENGTH_ADAPTER - Static variable in class info.bioinfweb.treegraph.document.io.newick.NewickStringReader
BRANCH_LENGTH_UNITS - Static variable in interface info.bioinfweb.treegraph.document.io.xtg.XTGConstants
BRANCH_LENGTH_VAR - Static variable in class info.bioinfweb.treegraph.document.undo.edit.CalculateColumnEdit
BRANCH_WIDT_DATA_NAME - Static variable in interface info.bioinfweb.treegraph.document.io.phyloxml.PhyloXMLConstants
branchDataRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.AddSupportValuesDialog
branches - Variable in class info.bioinfweb.treegraph.document.undo.format.AutoPositionLabelsEdit
BranchFormats - Class in info.bioinfweb.treegraph.document.format
BranchFormats() - Constructor for class info.bioinfweb.treegraph.document.format.BranchFormats
BranchLengthAdapter - Class in info.bioinfweb.treegraph.document.nodebranchdata
BranchLengthAdapter() - Constructor for class info.bioinfweb.treegraph.document.nodebranchdata.BranchLengthAdapter
branchLengthCheckBox - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.ExportToNewickStringDialog
BranchLengthEdit - Class in info.bioinfweb.treegraph.document.undo.edit
BranchLengthEdit(Document, Branch, double) - Constructor for class info.bioinfweb.treegraph.document.undo.edit.BranchLengthEdit
branchLengthInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.ExportToNewickStringDialog
branchLengthsAdapter - Variable in class info.bioinfweb.treegraph.document.io.newick.NewickStringReader
branchLengthScale - Variable in class info.bioinfweb.treegraph.document.format.GlobalFormats
branchLengthScale - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.ScaleValueInput
branchLengthScaleInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.GlobalFormatsDialog
branchLengthsDataInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.OpenDialog
branchLengthsPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.OpenDialog
branchLengthsRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.AddSupportValuesDialog
BranchLengthsScaler - Class in info.bioinfweb.treegraph.document.io.newick
  Sets the branch lengths scale of a tree so that the contained branched have a specific average length.
BranchLengthsScaler() - Constructor for class info.bioinfweb.treegraph.document.io.newick.BranchLengthsScaler
branchLengthToDistance(float, float) - Static method in class info.bioinfweb.treegraph.document.format.ScaleValue
BranchLineColorAdapter - Class in info.bioinfweb.treegraph.document.format.adapters.color
BranchLineColorAdapter() - Constructor for class info.bioinfweb.treegraph.document.format.adapters.color.BranchLineColorAdapter
BranchLineWidthAdapter - Class in info.bioinfweb.treegraph.document.format.adapters.distance
BranchLineWidthAdapter() - Constructor for class info.bioinfweb.treegraph.document.format.adapters.distance.BranchLineWidthAdapter
BranchMinLengthAdapter - Class in info.bioinfweb.treegraph.document.format.adapters.distance
BranchMinLengthAdapter() - Constructor for class info.bioinfweb.treegraph.document.format.adapters.distance.BranchMinLengthAdapter
BranchPanel - Class in info.bioinfweb.treegraph.gui.dialogs.elementformats
BranchPanel() - Constructor for class info.bioinfweb.treegraph.gui.dialogs.elementformats.BranchPanel
  This is the default constructor
branchPresent - Variable in class info.bioinfweb.treegraph.gui.treeframe.TreeSelection
BranchSpaceAboveAdapter - Class in info.bioinfweb.treegraph.document.format.adapters.distance
BranchSpaceAboveAdapter() - Constructor for class info.bioinfweb.treegraph.document.format.adapters.distance.BranchSpaceAboveAdapter
BranchSpaceBelowAdapter - Class in info.bioinfweb.treegraph.document.format.adapters.distance
BranchSpaceBelowAdapter() - Constructor for class info.bioinfweb.treegraph.document.format.adapters.distance.BranchSpaceBelowAdapter
buttonPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.AboutDialog

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