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## Uses of Interface
info.bioinfweb.treegraph.document.io.log.LoadLogger

Packages that use LoadLogger
info.bioinfweb.treegraph.cmd | Contains classes that process the command line arguments for TreeGraph 2.
info.bioinfweb.treegraph.document.io | Contains classes necessary to read and write the data structure of a TreeGraph 2 document from and to different formats.
info.bioinfweb.treegraph.document.io.log | Classes related to logging messages of document readers are contained in this package.
info.bioinfweb.treegraph.document.io.newick | Contains classes implementing the import from and export to the Newick format.
info.bioinfweb.treegraph.document.io.nexus | Contains classes implementing the import from and export to the Nexus format.
info.bioinfweb.treegraph.document.io.phyloxml | Contains classes implementing the import from the phyloXML format.
info.bioinfweb.treegraph.document.io.tgf | The classes in this package were planned to allow the import of TGF files into TreeGraph 2.
info.bioinfweb.treegraph.document.io.xtg | Contains classes implementing reading and writing of TreeGraph 2 documents.
info.bioinfweb.treegraph.gui.dialogs.io.loadlogger |

Uses of LoadLogger in info.bioinfweb.treegraph.cmd

Classes in info.bioinfweb.treegraph.cmd that implement LoadLogger
`class` | `CmdLoadLogger` Displays the messages of a `DocumentReader` class on the command line.

Uses of LoadLogger in info.bioinfweb.treegraph.document.io

Fields in info.bioinfweb.treegraph.document.io declared as LoadLogger
`protected LoadLogger` | `AbstractDocumentReader.loadLogger`

Methods in info.bioinfweb.treegraph.document.io with parameters of type LoadLogger
`Document` | `DocumentReader.read(File file, LoadLogger loadLogger)`
`Document` | `AbstractDocumentReader.read(File file, LoadLogger loadLogger)`
`Document` | `DocumentReader.read(File file, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter)`
`Document` | `AbstractDocumentReader.read(File file, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter)`
`Document` | `DocumentReader.read(File file, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter, TreeSelector selector, boolean translateInternalNodes)`
`Document` | `AbstractDocumentReader.read(File file, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter, TreeSelector selector, boolean translateInternalNodes)` If you want to implement file specific functionalities you should override this method.
`Document` | `DocumentReader.read(InputStream stream, LoadLogger loadLogger)`
`Document` | `AbstractDocumentReader.read(InputStream stream, LoadLogger loadLogger)`
`Document` | `DocumentReader.read(InputStream stream, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter)`
`Document` | `AbstractDocumentReader.read(InputStream stream, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter)`
`Document` | `DocumentReader.read(InputStream stream, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter, TreeSelector selector, boolean translateInternalNodes)`

Uses of LoadLogger in info.bioinfweb.treegraph.document.io.log

Classes in info.bioinfweb.treegraph.document.io.log that implement LoadLogger
`class` | `AbstractLoadLogger` Implements basic functionality (especially method delegation) of a load logger.

Uses of LoadLogger in info.bioinfweb.treegraph.document.io.newick

Methods in info.bioinfweb.treegraph.document.io.newick with parameters of type LoadLogger
`Document` | `NewickReader.read(File file, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter, TreeSelector selector, boolean translateInternals)`
`Document` | `NewickReader.read(InputStream stream, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter, TreeSelector selector, boolean translateInternals)`

Uses of LoadLogger in info.bioinfweb.treegraph.document.io.nexus

Methods in info.bioinfweb.treegraph.document.io.nexus with parameters of type LoadLogger
`Document` | `NexusReader.read(File file, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthAdapter, TreeSelector selector, boolean translateInternalNodes)`
`Document` | `NexusReader.read(InputStream stream, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthAdapter, TreeSelector selector, boolean translateInternalNodes)`

Uses of LoadLogger in info.bioinfweb.treegraph.document.io.phyloxml

Methods in info.bioinfweb.treegraph.document.io.phyloxml with parameters of type LoadLogger
`Document` | `PhyloXMLReader.read(InputStream stream, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter, TreeSelector selector, boolean translateInternalNodes)`

Uses of LoadLogger in info.bioinfweb.treegraph.document.io.tgf

Methods in info.bioinfweb.treegraph.document.io.tgf with parameters of type LoadLogger
`Document` | `TGFReader.read(InputStream stream, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter, TreeSelector selector, boolean translateInternalNodes)`

Uses of LoadLogger in info.bioinfweb.treegraph.document.io.xtg

Methods in info.bioinfweb.treegraph.document.io.xtg with parameters of type LoadLogger
`Document` | `XTGReader.read(File file, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter, TreeSelector selector, boolean translateInternalNodes)`
`Document` | `XTGReader.read(InputStream stream, LoadLogger loadLogger, NodeBranchDataAdapter internalAdapter, NodeBranchDataAdapter branchLengthsAdapter, TreeSelector selector, boolean translateInternalNodes)`

Uses of LoadLogger in info.bioinfweb.treegraph.gui.dialogs.io.loadlogger

Classes in info.bioinfweb.treegraph.gui.dialogs.io.loadlogger that implement LoadLogger
`class` | `LoadLoggerDialog` A dialog displaying messages from classes implementing `DocumentReader`.

Fields in info.bioinfweb.treegraph.gui.dialogs.io.loadlogger declared as LoadLogger
`private LoadLogger` | `LoadLoggerDialog.logger`

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