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Packages that use NexusCommand | |
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info.bioinfweb.treegraph.document.io.nexus | Contains classes implementing the import from and export to the Nexus format. |
Uses of NexusCommand in info.bioinfweb.treegraph.document.io.nexus |
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Methods in info.bioinfweb.treegraph.document.io.nexus that return NexusCommand | |
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private static NexusCommand[] |
NexusParser.scan(String content)
Splite the passed text into Nexus commands. |
Methods in info.bioinfweb.treegraph.document.io.nexus with parameters of type NexusCommand | |
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private static int |
NexusParser.findBlockEnd(NexusCommand[] commands,
int start,
int end)
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private static int |
NexusParser.findCommand(NexusCommand[] commands,
int start,
int end,
Pattern namePattern,
Pattern tokenPattern)
Searches for the first occurence of the given command. |
private static void |
NexusParser.readTranslTable(NexusCommand command,
TranslTable translTable)
Reads the content of the passed translation table from the passed command. |
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