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| PREV NEXT | FRAMES NO FRAMES | |||||||||
| info.bioinfweb.* |
|---|
| info.bioinfweb.treegraph.Main | ||
|---|---|---|
public static final String |
DOWNLOAD_URL |
"http://treegraph.bioinfweb.info/UpdateCenter/App/DownloadPage.jsp" |
public static final String |
ERROR_URL |
"http://treegraph.bioinfweb.info/errorreport/ApplicationReport.jsp" |
public static final String |
LATEST_VERSION_URL |
"http://treegraph.bioinfweb.info/UpdateCenter/App/VersionList.jsp" |
public static final int |
SPLASH_SCREEN_BORDER |
4 |
public static final String |
TG_URL |
"http://treegraph.bioinfweb.info/" |
public static final String |
WIKI_URL |
"http://treegraph.bioinfweb.info/Help/" |
| info.bioinfweb.treegraph.cmd.CmdLoadLogger | ||
|---|---|---|
public static final String |
WARNING_PREFIX |
"WARNING: " |
| info.bioinfweb.treegraph.cmd.CmdProcessor | ||
|---|---|---|
public static final String |
CONVERT_OPTION |
"-convert" |
public static final String |
DEFAULT_LABEL_ID |
"internals" |
public static final String |
IMAGE_OPTION |
"-image" |
public static final String |
LAST_VERSION_CHECK_PREF_KEY |
"lastVersionCheck" |
public static final String |
NEWICK_OPTION |
"-newick" |
public static final String |
NEXUS_OPTION |
"-nexus" |
public static final long |
VERSION_CHECK_INTERVAL |
3600000L |
public static final String |
VERSION_OPTION |
"-version" |
public static final String |
XTG_OPTION |
"-xtg" |
| info.bioinfweb.treegraph.cmd.ImageGenerator | ||
|---|---|---|
public static final String |
CLADOGRAM_OPTION |
"-clad" |
public static final String |
HEIGHT_OPTION |
"-height" |
public static final String |
PHYLOGRAM_OPTION |
"-phyl" |
public static final String |
RESOLUTION_OPTION |
"-res" |
public static final String |
UNIT_MM |
"mm" |
public static final String |
UNIT_PPI |
"ppi" |
public static final String |
UNIT_PPM |
"ppm" |
public static final String |
UNIT_PT |
"pt" |
public static final String |
UNIT_PX |
"px" |
public static final String |
WIDTH_OPTION |
"-width" |
| info.bioinfweb.treegraph.document.Document | ||
|---|---|---|
private static final int |
VIEWS_CAPACITY |
4 |
private static final int |
VIEWS_CAPACITY_INCREMENT |
4 |
| info.bioinfweb.treegraph.document.IDManager | ||
|---|---|---|
public static final String |
RAND_CHARS |
"ABCDEFGHIJKLMNOPQRSTUVWXYZ01234567890" |
public static final int |
RAND_LENGTH |
12 |
| info.bioinfweb.treegraph.document.LabelLine | ||
|---|---|---|
private static final int |
CAPACITY_INCREMENT |
4 |
private static final int |
INITIAL_CAPACITY |
4 |
| info.bioinfweb.treegraph.document.Labels | ||
|---|---|---|
private static final int |
CAPACITY_INCREMENT |
2 |
private static final int |
INITIAL_CAPACITY |
2 |
| info.bioinfweb.treegraph.document.Legends | ||
|---|---|---|
private static final int |
CAPACITY |
4 |
private static final int |
CAPACITY_INCREMENT |
4 |
| info.bioinfweb.treegraph.document.NodeLadderizeComparable | ||
|---|---|---|
public static final String |
CHILD_COUNT_KEY |
"ladderizeChildCount" |
| info.bioinfweb.treegraph.document.Tree | ||
|---|---|---|
public static final float |
DEFAULT_LONGEST_PATH_LENGTH |
150.0f |
public static final String |
UNIQUE_NAME_CHARS |
"abcdefghijklmnopqrstuvwxyz01234567890" |
public static final int |
UNIQUE_NAME_LENGTH |
10 |
| info.bioinfweb.treegraph.document.format.BranchFormats | ||
|---|---|---|
public static final float |
DEFAULT_MIN_LENGTH |
4.0f |
public static final boolean |
STD_CONSTANT_WIDTH |
false |
public static final float |
STD_MIN_SPACE_ABOVE |
0.0f |
public static final float |
STD_MIN_SPACE_BELOW |
0.0f |
| info.bioinfweb.treegraph.document.format.CornerRadiusFormats | ||
|---|---|---|
public static final float |
STD_EDGE_RADIUS_IN_MM |
1.0f |
| info.bioinfweb.treegraph.document.format.DistanceValue | ||
|---|---|---|
public static final float |
POINTS_PER_MM |
2.8346457481384277f |
| info.bioinfweb.treegraph.document.format.GlobalFormats | ||
|---|---|---|
public static final boolean |
DEFAULT_ALIGN_LEGENDS_TO_SUBTREE |
true |
public static final float |
DEFAULT_BRANCH_LENGTH_SCALE |
0.10000000149011612f |
public static final boolean |
DEFAULT_POSITION_LABELS_TO_LEFT |
true |
public static final boolean |
DEFAULT_SHOW_ROOTED |
true |
public static final boolean |
DEFAULT_SHOW_SCALE_BAR |
false |
| info.bioinfweb.treegraph.document.format.GraphicalLabelFormats | ||
|---|---|---|
public static final float |
DEFAULT_ICON_HEIGHT_IN_MM |
3.0f |
public static final float |
DEFAULT_ICON_WIDTH_IN_MM |
3.0f |
| info.bioinfweb.treegraph.document.format.LabelFormats | ||
|---|---|---|
public static final float |
DEFAULT_MARGIN_IN_MM |
1.0f |
| info.bioinfweb.treegraph.document.format.LegendFormats | ||
|---|---|---|
public static final float |
DEFAULT_SPACING_IN_MM |
1.0f |
public static final int |
STD_POSITION |
0 |
| info.bioinfweb.treegraph.document.format.LineFormats | ||
|---|---|---|
public static final float |
DEFAULT_LINE_WIDTH_IN_MM |
0.30000001192092896f |
| info.bioinfweb.treegraph.document.format.PieChartLabelFormats | ||
|---|---|---|
public static final boolean |
DEFAULT_SHOW_INTERNAL_LINES |
true |
public static final boolean |
DEFAULT_SHOW_NULL_LINES |
false |
| info.bioinfweb.treegraph.document.format.ScaleBarFormats | ||
|---|---|---|
public static final float |
DEFAULT_HEIGHT_IN_MM |
3.0f |
public static final boolean |
DEFAULT_INCREASING |
true |
public static final int |
DEFAULT_LONG_INTERVAL |
10 |
public static final float |
DEFAULT_SMALL_INTERVAL |
10.0f |
public static final float |
DEFAULT_SMALL_INTERVAL_IN_MM |
1.0f |
public static final boolean |
DEFAULT_START_LEFT |
true |
public static final float |
DEFAULT_TEXT_HEIGHT_IN_MM |
4.0f |
public static final float |
DEFAULT_TREE_DISTANCE_IN_MM |
2.0f |
public static final float |
DEFAULT_WIDTH_IN_MM |
20.0f |
| info.bioinfweb.treegraph.document.format.TextFormats | ||
|---|---|---|
public static final int |
BOLD |
1 |
public static final String |
DEFAULT_DECIMAL_FORMAT_EXPR |
"0.0#####" |
public static final String |
DEFAULT_FONT_NAME |
"Arial" |
public static final float |
DEFAULT_TEXT_HEIGHT_IN_MM |
6.0f |
public static final int |
ITALIC |
2 |
public static final int |
PLAIN |
0 |
public static final int |
UNDERLINE |
4 |
| info.bioinfweb.treegraph.document.format.TextLabelFormats | ||
|---|---|---|
public static final float |
DEFAULT_TEXT_HEIGHT_IN_MM |
4.0f |
| info.bioinfweb.treegraph.document.io.AbstractXMLFilter | ||
|---|---|---|
public static final String |
XML_EXTENSION |
".xml" |
| info.bioinfweb.treegraph.document.io.newick.CommentDataReader | ||
|---|---|---|
public static final char |
ALLOCATION_SEPARATOR_SYMBOL |
44 |
public static final char |
ALLOCATION_SYMBOL |
61 |
public static final char |
FIELD_END_SYMBOL |
125 |
public static final char |
FIELD_START_SYMBOL |
123 |
public static final char |
INDEX_END_SYMBOL |
93 |
public static final char |
INDEX_START_SYMBOL |
91 |
public static final char |
START_SYMBOL |
38 |
public static final char |
VALUE_SEPARATOR_SYMBOL |
44 |
| info.bioinfweb.treegraph.document.io.newick.NewickException | ||
|---|---|---|
public static final int |
CHAR_COUNT_AFTER |
30 |
public static final int |
CHAR_COUNT_BEFORE |
20 |
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.document.io.newick.NewickStringChars | ||
|---|---|---|
public static final char |
COMMENT_END |
93 |
public static final char |
COMMENT_START |
91 |
public static final char |
ELEMENT_SEPERATOR |
44 |
public static final char |
FREE_NAME_BLANK |
95 |
public static final char |
LENGTH_SEPERATOR |
58 |
public static final char |
NAME_DELIMITER |
39 |
public static final char |
SUBTREE_END |
41 |
public static final char |
SUBTREE_START |
40 |
public static final char |
TERMINAL_SYMBOL |
59 |
| info.bioinfweb.treegraph.document.io.nexus.NexusParser | ||
|---|---|---|
public static final char |
COMMAND_SEPARATOR |
59 |
public static final char |
COMMENT_END |
93 |
public static final char |
COMMENT_START |
91 |
public static final String |
NAME_BLOCK_BEGIN |
"begin" |
public static final String |
NAME_BLOCK_END |
"end" |
public static final char |
NAME_DELIMITER |
39 |
public static final String |
NAME_NEXUS |
"#nexus" |
public static final String |
NAME_TRANSL_TABLE |
"translate" |
public static final String |
NAME_TREES |
"trees" |
public static final String |
ROOTED_COMMAND |
"&r" |
public static final String |
TREE_COMMAND |
"tree" |
public static final char |
TREE_NAME_SEPERATOR |
61 |
public static final String |
UNROOTED_COMMAND |
"&u" |
| info.bioinfweb.treegraph.document.io.phyloxml.PhyloXMLConstants | ||
|---|---|---|
public static final String |
BRANCH_WIDT_DATA_NAME |
"phyloXML.branch_width" |
public static final String |
DEFAULT_CONFIDENCE_NAME |
"Confidence " |
public static final String |
DEFAULT_TREE_NAME |
"Tree " |
public static final String |
ID_PREFIX |
"phyloXML." |
public static final String |
NAMESPACE_URI |
"http://www.phyloxml.org" |
| info.bioinfweb.treegraph.document.io.tgf.TGFFilter | ||
|---|---|---|
public static final String |
EXTENSION |
".tgf" |
| info.bioinfweb.treegraph.document.io.tgf.TGFReader | ||
|---|---|---|
private static final int |
SECOUND_LINE_POS |
100 |
| info.bioinfweb.treegraph.document.io.xtg.XTGConstants | ||
|---|---|---|
public static final String |
ALIGN_LEFT |
"left" |
public static final String |
ALIGN_RIGHT |
"right" |
public static final String |
ALIGN_TREE_WIDTH |
"treeWidth" |
public static final String |
BRANCH_LENGTH_UNITS |
"u" |
public static final String |
MILLIMETERS |
"mm" |
public static final String |
NAMESPACE_URI |
"http://bioinfweb.info/xmlns/xtg" |
public static final String |
ORIENT_DOWN |
"down" |
public static final String |
ORIENT_HORIZONTAL |
"horizontal" |
public static final String |
ORIENT_UP |
"up" |
public static final String |
PRE_LEGEND_ANCHOR |
"Anchor" |
public static final String |
STYLE_BOLD |
"b" |
public static final String |
STYLE_BRACE |
"brace" |
public static final String |
STYLE_BRACKET |
"bracket" |
public static final String |
STYLE_ITALIC |
"i" |
public static final String |
STYLE_UNDERLINE |
"u" |
public static final String |
TAG_BRANCH |
"Branch" |
public static final String |
TAG_DOC_MARGIN |
"DocMargin" |
public static final String |
TAG_GLOBAL_FORMATS |
"GlobalFormats" |
public static final String |
TAG_HIDDEN_DATA |
"InvisibleData" |
public static final String |
TAG_ICON_LABEL |
"IconLabel" |
public static final String |
TAG_LABEL_MARGIN |
"LabelMargin" |
public static final String |
TAG_LEAF_MARGIN |
"LeafMargin" |
public static final String |
TAG_LEGEND |
"Legend" |
public static final String |
TAG_LEGEND_MARGIN |
"LegendMargin" |
public static final String |
TAG_NODE |
"Node" |
public static final String |
TAG_PIE_CHART_ID |
"DataId" |
public static final String |
TAG_PIE_CHART_IDS |
"DataIds" |
public static final String |
TAG_PIE_CHART_LABEL |
"PieChartLabel" |
public static final String |
TAG_ROOT |
"TreegraphDocument" |
public static final String |
TAG_SCALE_BAR |
"ScaleBar" |
public static final String |
TAG_TEXT_LABEL |
"TextLabel" |
public static final String |
TAG_TREE |
"Tree" |
| info.bioinfweb.treegraph.document.io.xtg.XTGFilter | ||
|---|---|---|
public static final String |
EXTENSION |
".xtg" |
| info.bioinfweb.treegraph.document.io.xtg.XTGWriter | ||
|---|---|---|
public static final String |
STREAM_ENCODING |
"UTF8" |
| info.bioinfweb.treegraph.document.undo.edit.CalculateColumnEdit | ||
|---|---|---|
public static final String |
BRANCH_LENGTH_VAR |
"LENGTH" |
public static final String |
CURRENT_VALUE_VAR |
"THIS" |
public static final String |
GET_VALUE_FUNC |
"getValue" |
public static final String |
HAS_VALUE_FUNC |
"hasValue" |
public static final String |
NODE_NAMES_VAR |
"NAME" |
public static final String |
UNIQUE_NODE_NAMES_VAR |
"UNIQUE" |
| info.bioinfweb.treegraph.document.undo.edit.RerootEdit | ||
|---|---|---|
public static final int |
DIALOG_HELP_TOPIC |
24 |
| info.bioinfweb.treegraph.document.undo.file.AddSupportValuesEdit | ||
|---|---|---|
public static final String |
CONFLICT_NAME |
"Conflict" |
public static final int |
MAX_TERMINAL_ERROR_COUNT |
10 |
public static final String |
SUPPORT_NAME |
"Support" |
| info.bioinfweb.treegraph.document.undo.format.AutoPositionLabelsEdit | ||
|---|---|---|
public static final double |
LABEL_BLOCK_ASPECT_RATIO |
2.0 |
public static final int |
LINE_POSITION_STEP |
10 |
| info.bioinfweb.treegraph.graphics.export.GraphicWriter | ||
|---|---|---|
public static final String |
KEY_DIMENSIONS_IN_PIXELS |
"dimensionsInPixels" |
public static final String |
KEY_HEIGHT |
"height" |
public static final String |
KEY_PIXELS_PER_MILLIMETER |
"ppm" |
public static final String |
KEY_TRANSPARENT |
"transparent" |
public static final String |
KEY_WIDTH |
"width" |
| info.bioinfweb.treegraph.graphics.export.emf.EMFFilter | ||
|---|---|---|
public static final String |
EXTENSION |
".emf" |
| info.bioinfweb.treegraph.graphics.export.jpeg.JPEGFilter | ||
|---|---|---|
public static final String |
ALTERNATIVE_EXTENSION_1 |
".jpg" |
public static final String |
ALTERNATIVE_EXTENSION_2 |
".jpe" |
public static final String |
EXTENSION |
".jpeg" |
| info.bioinfweb.treegraph.graphics.export.jpeg.JPEGWriter | ||
|---|---|---|
public static final float |
DEFAULT_QUALITY |
0.800000011920929f |
public static final String |
KEY_JPEG_QUALITY |
"jpegCompression" |
public static final float |
MAX_QUALITY |
1.0f |
public static final float |
MIN_QUALITY |
0.009999999776482582f |
| info.bioinfweb.treegraph.graphics.export.pdf.PDFFilter | ||
|---|---|---|
public static final String |
EXTENSION |
".pdf" |
| info.bioinfweb.treegraph.graphics.export.png.PNGFilter | ||
|---|---|---|
public static final String |
EXTENSION |
".png" |
| info.bioinfweb.treegraph.graphics.export.svg.SVGFilter | ||
|---|---|---|
public static final String |
EXTENSION |
".svg" |
| info.bioinfweb.treegraph.graphics.export.tiff.TIFFFilter | ||
|---|---|---|
public static final String |
ALTERNATIVE_EXTENSION |
".tif" |
public static final String |
EXTENSION |
".tiff" |
| info.bioinfweb.treegraph.graphics.export.tiff.TIFFWriter | ||
|---|---|---|
public static final String |
DEFAULT_COMPRESSION_METHOD |
"none" |
public static final String |
KEY_TIFF_COMPRESSION_METHOD |
"tiffCompressionMethod" |
| info.bioinfweb.treegraph.graphics.positionpaint.RectangularCladogramPainter | ||
|---|---|---|
public static final float |
SELECTION_DISTANCE |
2.0f |
public static final float |
SHORT_DASH_SCALE_FACTOR |
0.5f |
public static final float |
UNDERLINE_DISTANCE_FACTOR |
0.15000000596046448f |
public static final float |
UNDERLINE_LINE_WIDTH_FACTOR |
0.05000000074505806f |
public static final float |
UNDERLINE_X_SHIFT_FACTOR |
0.07000000029802322f |
| info.bioinfweb.treegraph.graphics.positionpaint.labelicons.RoundRectangleIcon | ||
|---|---|---|
public static final float |
EDGE_RADIUS_FACTOR |
0.15000000596046448f |
| info.bioinfweb.treegraph.graphics.positionpaint.labelicons.StarIcon | ||
|---|---|---|
public static final String |
ID |
"Star" |
public static final float |
LENGTH_BETWEEN_RAYS_FACTOR |
0.3333333432674408f |
public static final double |
RAY_ANGLE |
1.2566370614359172 |
| info.bioinfweb.treegraph.graphics.positionpaint.labelicons.UnknownIcon | ||
|---|---|---|
public static final String |
TEXT |
"?" |
| info.bioinfweb.treegraph.gui.CurrentDirectoryModel | ||
|---|---|---|
public static final String |
CURRENT_DIR_PREF_KEY |
"currentDir" |
| info.bioinfweb.treegraph.gui.actions.edit.ReplaceInNodeDataAction | ||
|---|---|---|
public static final String |
TEXT |
"Replace text in node/branch data..." |
| info.bioinfweb.treegraph.gui.actions.file.ExportToPDFAction | ||
|---|---|---|
public static final String |
FILE_PREFIX |
"Tree" |
public static final String |
FILE_SUFFIX |
".pdf" |
| info.bioinfweb.treegraph.gui.dialogs.AboutDialog | ||
|---|---|---|
public static final String |
RESOURCES_PATH |
"/resources/about/" |
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.DistanceValueInput | ||
|---|---|---|
public static final String |
UNIT_MILLIMETERS |
"mm" |
public static final String |
UNIT_POINTS |
"pt" |
| info.bioinfweb.treegraph.gui.dialogs.GlobalFormatsDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.ReplaceInNodeDataDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.ResolutionInput | ||
|---|---|---|
public static final float |
MM_PER_INCH |
25.399999618530273f |
public static final String |
UNIT_PPI |
"pixel per inch (ppi)" |
public static final String |
UNIT_PPMM |
"pixel per mm" |
| info.bioinfweb.treegraph.gui.dialogs.ScaleBranchLengthsDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.SearchTextDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.editelement.ChangeIDDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.editelement.EditBranchLengthDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.editelement.EditPieChartLabelsDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.editelement.EditTextElementDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.editelement.NewGraphicalLabelsDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.editelement.NewIconLabelsDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.editelement.NewPieChartLabelsDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.BranchPanel | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.DecimalFormatPanel | ||
|---|---|---|
public static final double |
FORMAT_EXAMPLE |
1125024.87356218 |
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.ElementFormatsDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.FontColorPanel | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.FontFormatsPanel | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
private static final int |
VISIBLE_ROW_COUNT |
8 |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.IconPieChartLabelPanel | ||
|---|---|---|
public static final int |
PREVIEW_SIZE |
50 |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.LinePanel | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.NodeMarginPanel | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.ScaleBarPanel | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.ScaleValueInput | ||
|---|---|---|
public static final String |
UNIT_SCALE |
"branch length units" |
| info.bioinfweb.treegraph.gui.dialogs.elementformats.piecolor.PieColorIcon | ||
|---|---|---|
public static final int |
ICON_DOMENSION |
16 |
| info.bioinfweb.treegraph.gui.dialogs.io.AddSupportValuesDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.io.ApplyNameTableDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.io.AssignImportColumnsDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
private static final int |
USED_ROWS |
2 |
| info.bioinfweb.treegraph.gui.dialogs.io.ExportTableDialog | ||
|---|---|---|
public static final String |
EXPORT_FILE_EXT |
"txt" |
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.io.ExportToNewickStringDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.io.ImportTableDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.io.NewickExceptionDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.io.OpenDialog | ||
|---|---|---|
public static final String |
DEFAULT_BRANCH_LENGTH_ID |
"lengths" |
public static final String |
DEFAULT_NODE_NAME_ID |
"support" |
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.io.TableSeparatorPanel | ||
|---|---|---|
public static final String |
DEFAULT_SEPARATOR |
";" |
| info.bioinfweb.treegraph.gui.dialogs.io.TreeSelectionDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.io.exporttographic.ExportToGraphicDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
public static final String |
UNIT_MILLIMETERS |
"mm" |
public static final String |
UNIT_PIXELS |
"px" |
public static final String |
UNIT_POINTS |
"pt" |
| info.bioinfweb.treegraph.gui.dialogs.io.exporttographic.JPEGPrefPanel | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.io.exporttographic.TransparentBgPrefPanel | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.io.loadlogger.LoadLoggerDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.nodebranchdata.CalculateColumnDialog | ||
|---|---|---|
public static final int |
MIN_EXPRESSION_FIELD_WIDTH |
300 |
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.nodebranchdata.CopyColumnDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.nodebranchdata.IntervalDialog | ||
|---|---|---|
public static final double |
DEFAULT_LOWER_BORDER |
50.0 |
public static final double |
DEFAULT_UPPER_BORDER |
100.0 |
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.nodebranchdata.RecentlyUsedExpressionsListModel | ||
|---|---|---|
public static final String |
FILE_NAME |
"RecentlyUsedExpressions.txt" |
public static final int |
MAXIMAL_COUNT |
25 |
| info.bioinfweb.treegraph.gui.dialogs.nodebranchdata.RenameIDDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.specialformats.ColorsByNodeBranchDataDialog | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.specialformats.DistanceValuesByNodeBranchDataDialog | ||
|---|---|---|
public static final double |
DEFAULT_MAX_WIDTH_IN_MM |
10.0 |
public static final double |
DEFAULT_MIN_WIDTH_IN_MM |
0.3 |
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.dialogs.specialformats.ScaleDistanceValuesDialog | ||
|---|---|---|
public static final float |
DEFAULT_SCALE |
1.0f |
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.mainframe.MainFrame | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
private static final int |
WINDOW_MENU_ITEMS_COUNT |
3 |
| info.bioinfweb.treegraph.gui.mainframe.tools.DistanceValuePopup | ||
|---|---|---|
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.treeframe.DocumentTableModel | ||
|---|---|---|
public static final int |
COL_BRANCH_LENGTH_DATA_TYPE |
5 |
public static final int |
COL_UNIQUE_NAME_DATA_TYPE |
1 |
public static final String |
DECIMAL_COLUMN_HEADING |
"Dec" |
| info.bioinfweb.treegraph.gui.treeframe.info.bioinfweb.treegraph.gui.treeframe.TreeEditlInputListener | ||
|---|---|---|
public static final float |
ZOOM_PER_CLICK |
0.10000000149011612f |
| info.bioinfweb.treegraph.gui.treeframe.TreeInternalFrame | ||
|---|---|---|
public static final int |
DATA_COLUMN_WIDTH |
135 |
public static final int |
DECIMAL_COLUMN_WIDTH |
25 |
public static final double |
TREE_WIDTH_RATIO |
0.5 |
| info.bioinfweb.treegraph.gui.treeframe.TreeViewPanel | ||
|---|---|---|
public static final int |
MAX_SELECTION_COLOR_DIF |
200 |
public static final float |
MIN_ZOOM |
0.10000000149011612f |
public static final float |
PIXELS_PER_MM_100 |
2.8346457481384277f |
public static final float |
SELECTION_MARGIN |
2.0f |
private static final long |
serialVersionUID |
1L |
| info.bioinfweb.treegraph.gui.treeframe.ruler.TreeViewRuler | ||
|---|---|---|
public static final float |
DASH_LENGTH |
10.0f |
public static final float |
LABEL_DISTANCE |
-2.200000047683716f |
public static final String |
LABEL_LENGTH_STANDARD |
"000" |
public static final float |
MEDIUM_FACTOR |
0.800000011920929f |
public static final float |
MIN_DASH_DISTANCE |
2.5f |
public static final float |
SMALL_FACTOR |
0.5f |
| info.bioinfweb.treegraph.gui.treeframe.ruler.TreeViewRulerConstants | ||
|---|---|---|
public static final int |
SMALL_LENGTH |
20 |
| info.bioinfweb.treegraph.gui.treeframe.ruler.TreeViewRulerUnitField | ||
|---|---|---|
public static final String |
TEXT_CENTIMETER |
"cm" |
public static final String |
TEXT_INCH |
"in" |
|
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