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D

DASH_LENGTH - Static variable in class info.bioinfweb.treegraph.gui.treeframe.ruler.TreeViewRuler

The maximal length of a dash

data - Variable in class info.bioinfweb.treegraph.document.AbstractTextElement

data - Variable in class info.bioinfweb.treegraph.document.TextLabel

data - Variable in class info.bioinfweb.treegraph.document.undo.file.ImportTableEdit

DATA_COLUMN_WIDTH - Static variable in class info.bioinfweb.treegraph.gui.treeframe.TreeInternalFrame

DataIDComboBox - Class in info.bioinfweb.treegraph.gui.dialogs

Component used to select data IDs (for labels, hidden node/branch data).

DataIDComboBox(boolean) - Constructor for class info.bioinfweb.treegraph.gui.dialogs.DataIDComboBox

decimal - Variable in class info.bioinfweb.treegraph.document.TextElementData

decimal - Variable in class info.bioinfweb.treegraph.document.undo.edit.SetColumnTypeEdit

decimal - Variable in class info.bioinfweb.treegraph.gui.actions.edit.SetColumnTypeAction

DECIMAL_COLUMN_HEADING - Static variable in class info.bioinfweb.treegraph.gui.treeframe.DocumentTableModel

DECIMAL_COLUMN_WIDTH - Static variable in class info.bioinfweb.treegraph.gui.treeframe.TreeInternalFrame

DECIMAL_FORMAT - Variable in class info.bioinfweb.treegraph.document.nodebranchdata.HiddenDataAdapter

decimalCheckBox - Variable in class info.bioinfweb.treegraph.gui.dialogs.editelement.AbstractTextElementDialog

decimalFormat - Variable in class info.bioinfweb.treegraph.document.format.ConcreteTextFormats

decimalFormat - Variable in class info.bioinfweb.treegraph.document.format.operate.DecimalFormatOperator

decimalFormat - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LabelPanel

decimalFormat - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel

decimalFormat - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.exporttographic.ExportToGraphicDialog

DecimalFormatOperator - Class in info.bioinfweb.treegraph.document.format.operate

This operator is used to change the decimal format of a TextFormats-object.

DecimalFormatOperator(DecimalFormat, Locale) - Constructor for class info.bioinfweb.treegraph.document.format.operate.DecimalFormatOperator

DecimalFormatPanel - Class in info.bioinfweb.treegraph.gui.dialogs.elementformats

Panel of the ElementFormatsDialog used to edit the decimal formats of text elements.

DecimalFormatPanel() - Constructor for class info.bioinfweb.treegraph.gui.dialogs.elementformats.DecimalFormatPanel

This is the default constructor

DecimalFormatsTableModel - Class in info.bioinfweb.treegraph.gui.dialogs.elementformats

Table modes used with the DecimalFormatPanel.

DecimalFormatsTableModel() - Constructor for class info.bioinfweb.treegraph.gui.dialogs.elementformats.DecimalFormatsTableModel

decimalFormatterFactory - Variable in class info.bioinfweb.treegraph.gui.dialogs.editelement.AbstractTextElementDialog

decimalInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.editelement.EditBranchLengthDialog

decimalOnly() - Method in class info.bioinfweb.treegraph.document.nodebranchdata.BranchLengthAdapter

decimalOnly() - Method in interface info.bioinfweb.treegraph.document.nodebranchdata.NodeBranchDataAdapter

decimalOnly() - Method in class info.bioinfweb.treegraph.document.nodebranchdata.TextElementDataAdapter

decimalOnly() - Method in class info.bioinfweb.treegraph.document.nodebranchdata.UniqueNameAdapter

DecimalUnitInput - Class in info.bioinfweb.treegraph.gui.dialogs

Specialization of DecimalInput to manage distance values in different units.

DecimalUnitInput(String, JPanel, int) - Constructor for class info.bioinfweb.treegraph.gui.dialogs.DecimalUnitInput

DecimalUnitInput(String, JPanel, int, int) - Constructor for class info.bioinfweb.treegraph.gui.dialogs.DecimalUnitInput

decRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.ScaleBarPanel

DEFAULT_ADAPTER - Static variable in class info.bioinfweb.treegraph.document.io.AbstractDocumentWriter

DEFAULT_ALIGN_LEGENDS_TO_SUBTREE - Static variable in class info.bioinfweb.treegraph.document.format.GlobalFormats

DEFAULT_ALIGNMENT - Static variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats

DEFAULT_BACKGROUNG_COLOR - Static variable in class info.bioinfweb.treegraph.document.format.GlobalFormats

DEFAULT_BRANCH_LENGTH_ID - Static variable in class info.bioinfweb.treegraph.gui.dialogs.io.OpenDialog

DEFAULT_BRANCH_LENGTH_SCALE - Static variable in class info.bioinfweb.treegraph.document.format.GlobalFormats

DEFAULT_COLORS - Static variable in class info.bioinfweb.treegraph.document.PieColorManager

DEFAULT_COMPRESSION_METHOD - Static variable in class info.bioinfweb.treegraph.graphics.export.tiff.TIFFWriter

DEFAULT_CONFIDENCE_NAME - Static variable in interface info.bioinfweb.treegraph.document.io.phyloxml.PhyloXMLConstants

DEFAULT_DECIMAL_FORMAT_EXPR - Static variable in interface info.bioinfweb.treegraph.document.format.TextFormats

DEFAULT_FONT_NAME - Static variable in interface info.bioinfweb.treegraph.document.format.TextFormats

DEFAULT_HEIGHT_IN_MM - Static variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats

DEFAULT_ICON_HEIGHT_IN_MM - Static variable in class info.bioinfweb.treegraph.document.format.GraphicalLabelFormats

DEFAULT_ICON_WIDTH_IN_MM - Static variable in class info.bioinfweb.treegraph.document.format.GraphicalLabelFormats

DEFAULT_INCREASING - Static variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats

DEFAULT_LABEL_ID - Static variable in class info.bioinfweb.treegraph.cmd.CmdProcessor

DEFAULT_LINE_COLOR - Static variable in interface info.bioinfweb.treegraph.document.format.LineFormats

DEFAULT_LINE_WIDTH_IN_MM - Static variable in interface info.bioinfweb.treegraph.document.format.LineFormats

DEFAULT_LOCALE - Static variable in interface info.bioinfweb.treegraph.document.format.TextFormats

DEFAULT_LONG_INTERVAL - Static variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats

DEFAULT_LONGEST_PATH_LENGTH - Static variable in class info.bioinfweb.treegraph.document.Tree

The default length of the longest path from the root to a leaf in millimeters.

DEFAULT_LOWER_BORDER - Static variable in class info.bioinfweb.treegraph.gui.dialogs.nodebranchdata.IntervalDialog

DEFAULT_MARGIN_IN_MM - Static variable in class info.bioinfweb.treegraph.document.format.LabelFormats

DEFAULT_MAX_COLOR - Static variable in class info.bioinfweb.treegraph.gui.dialogs.specialformats.ColorPreviewPanel

DEFAULT_MAX_WIDTH_IN_MM - Static variable in class info.bioinfweb.treegraph.gui.dialogs.specialformats.DistanceValuesByNodeBranchDataDialog

DEFAULT_MIN_COLOR - Static variable in class info.bioinfweb.treegraph.gui.dialogs.specialformats.ColorPreviewPanel

DEFAULT_MIN_LENGTH - Static variable in class info.bioinfweb.treegraph.document.format.BranchFormats

DEFAULT_MIN_WIDTH_IN_MM - Static variable in class info.bioinfweb.treegraph.gui.dialogs.specialformats.DistanceValuesByNodeBranchDataDialog

DEFAULT_NODE_NAME_ID - Static variable in class info.bioinfweb.treegraph.gui.dialogs.io.OpenDialog

DEFAULT_POSITION_LABELS_TO_LEFT - Static variable in class info.bioinfweb.treegraph.document.format.GlobalFormats

DEFAULT_QUALITY - Static variable in class info.bioinfweb.treegraph.graphics.export.jpeg.JPEGWriter

DEFAULT_SCALE - Static variable in class info.bioinfweb.treegraph.gui.dialogs.specialformats.ScaleDistanceValuesDialog

DEFAULT_SELECTION_COLOR - Static variable in class info.bioinfweb.treegraph.gui.treeframe.TreeViewPanel

DEFAULT_SEPARATOR - Static variable in class info.bioinfweb.treegraph.gui.dialogs.io.TableSeparatorPanel

The default separeter which is not a tab.

DEFAULT_SHOW_INTERNAL_LINES - Static variable in class info.bioinfweb.treegraph.document.format.PieChartLabelFormats

DEFAULT_SHOW_NULL_LINES - Static variable in class info.bioinfweb.treegraph.document.format.PieChartLabelFormats

DEFAULT_SHOW_ROOTED - Static variable in class info.bioinfweb.treegraph.document.format.GlobalFormats

DEFAULT_SHOW_SCALE_BAR - Static variable in class info.bioinfweb.treegraph.document.format.GlobalFormats

DEFAULT_SMALL_INTERVAL - Static variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats

The default small interval length in branch length units.

DEFAULT_SMALL_INTERVAL_IN_MM - Static variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats

The default small interval length in millimeters.

DEFAULT_SPACING_IN_MM - Static variable in class info.bioinfweb.treegraph.document.format.LegendFormats

DEFAULT_START_LEFT - Static variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats

DEFAULT_TEXT_COLOR - Static variable in interface info.bioinfweb.treegraph.document.format.TextFormats

DEFAULT_TEXT_HEIGHT_IN_MM - Static variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats

DEFAULT_TEXT_HEIGHT_IN_MM - Static variable in interface info.bioinfweb.treegraph.document.format.TextFormats

DEFAULT_TEXT_HEIGHT_IN_MM - Static variable in class info.bioinfweb.treegraph.document.format.TextLabelFormats

DEFAULT_TREE_DISTANCE_IN_MM - Static variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats

DEFAULT_TREE_NAME - Static variable in interface info.bioinfweb.treegraph.document.io.phyloxml.PhyloXMLConstants

DEFAULT_UPPER_BORDER - Static variable in class info.bioinfweb.treegraph.gui.dialogs.nodebranchdata.IntervalDialog

DEFAULT_WIDTH_IN_MM - Static variable in class info.bioinfweb.treegraph.document.format.ScaleBarFormats

defaultDecimalFormat - Variable in class info.bioinfweb.treegraph.document.nodebranchdata.TextLabelAdapter

DefaultTreeSelector - Class in info.bioinfweb.treegraph.document.io

This TreeSelector always selects the first tree.

DefaultTreeSelector() - Constructor for class info.bioinfweb.treegraph.document.io.DefaultTreeSelector

delete(Node) - Method in class info.bioinfweb.treegraph.document.nodebranchdata.BranchLengthAdapter

delete(Node) - Method in class info.bioinfweb.treegraph.document.nodebranchdata.HiddenDataAdapter

delete(Node) - Method in interface info.bioinfweb.treegraph.document.nodebranchdata.NodeBranchDataAdapter

delete(Node) - Method in class info.bioinfweb.treegraph.document.nodebranchdata.TextElementDataAdapter

delete(Node) - Method in class info.bioinfweb.treegraph.document.nodebranchdata.TextLabelAdapter

delete(Node) - Method in class info.bioinfweb.treegraph.document.nodebranchdata.UniqueNameAdapter

DeleteColumnAction - Class in info.bioinfweb.treegraph.gui.actions.edit

DeleteColumnAction(MainFrame) - Constructor for class info.bioinfweb.treegraph.gui.actions.edit.DeleteColumnAction

DeleteColumnEdit - Class in info.bioinfweb.treegraph.document.undo.edit

DeleteColumnEdit(Document, NodeBranchDataAdapter) - Constructor for class info.bioinfweb.treegraph.document.undo.edit.DeleteColumnEdit

DeleteEdit - Class in info.bioinfweb.treegraph.document.undo.edit

Removes all elements currently selected.

DeleteEdit(Document, ConcretePaintableElement[], boolean) - Constructor for class info.bioinfweb.treegraph.document.undo.edit.DeleteEdit

DeleteElementAction - Class in info.bioinfweb.treegraph.gui.actions.edit

DeleteElementAction(MainFrame) - Constructor for class info.bioinfweb.treegraph.gui.actions.edit.DeleteElementAction

deleteLength() - Method in class info.bioinfweb.treegraph.document.Branch

DeleteOutsideIntervalAction - Class in info.bioinfweb.treegraph.gui.actions.edit

DeleteOutsideIntervalAction(MainFrame) - Constructor for class info.bioinfweb.treegraph.gui.actions.edit.DeleteOutsideIntervalAction

DeleteOutsideIntervalEdit - Class in info.bioinfweb.treegraph.document.undo.edit

DeleteOutsideIntervalEdit(Document, NodeBranchDataAdapter, double, double) - Constructor for class info.bioinfweb.treegraph.document.undo.edit.DeleteOutsideIntervalEdit

deleteOutsideIntervalSubtree(Node) - Method in class info.bioinfweb.treegraph.document.undo.edit.DeleteOutsideIntervalEdit

DeleteSubelementsAction - Class in info.bioinfweb.treegraph.gui.actions.edit

DeleteSubelementsAction(MainFrame) - Constructor for class info.bioinfweb.treegraph.gui.actions.edit.DeleteSubelementsAction

DeleteSubelementsEdit - Class in info.bioinfweb.treegraph.document.undo.edit

DeleteSubelementsEdit(Document, Node, boolean) - Constructor for class info.bioinfweb.treegraph.document.undo.edit.DeleteSubelementsEdit

deleteSubtree(Node, NodeBranchDataAdapter) - Static method in class info.bioinfweb.treegraph.document.undo.edit.DeleteColumnEdit

deleteSubtreeElements() - Method in class info.bioinfweb.treegraph.document.undo.edit.DeleteEdit

delimited - Variable in class info.bioinfweb.treegraph.document.io.newick.NewickToken

desktopPane - Variable in class info.bioinfweb.treegraph.gui.mainframe.MainFrame

destInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.nodebranchdata.CopyColumnDialog

destLabel - Variable in class info.bioinfweb.treegraph.gui.dialogs.nodebranchdata.CopyColumnDialog

dialog - Variable in class info.bioinfweb.treegraph.gui.actions.edit.SearchTextAction

dialog - Variable in class info.bioinfweb.treegraph.gui.actions.EditDialogAction

dialog - Variable in class info.bioinfweb.treegraph.gui.actions.file.ExportToGraphicAction

dialog - Variable in class info.bioinfweb.treegraph.gui.actions.help.AboutAction

DIALOG_HELP_TOPIC - Static variable in class info.bioinfweb.treegraph.document.undo.edit.RerootEdit

die() - Method in class info.bioinfweb.treegraph.document.undo.DocumentEdit

difAbove - Variable in class info.bioinfweb.treegraph.document.position.NodePositionData

difBelow - Variable in class info.bioinfweb.treegraph.document.position.NodePositionData

dimensionPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.IconPieChartLabelPanel

dimensionsInPixels() - Method in class info.bioinfweb.treegraph.gui.dialogs.io.exporttographic.ExportToGraphicDialog

dimensionsPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.ScaleBarPanel

dimensionsPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.exporttographic.ExportToGraphicDialog

directionPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.ScaleBarPanel

display() - Method in class info.bioinfweb.treegraph.gui.dialogs.io.loadlogger.LoadLoggerDialog

Packs, positions and shows this modal dialog if the message list is not empty.

distance - Variable in class info.bioinfweb.treegraph.document.format.operate.MinTreeDistanceOperator

DistanceAdapter - Interface in info.bioinfweb.treegraph.document.format.adapters.distance

DistanceAdapterListModel - Class in info.bioinfweb.treegraph.gui.dialogs.specialformats

DistanceAdapterListModel() - Constructor for class info.bioinfweb.treegraph.gui.dialogs.specialformats.DistanceAdapterListModel

DistanceDimension - Class in info.bioinfweb.treegraph.document.format

DistanceDimension() - Constructor for class info.bioinfweb.treegraph.document.format.DistanceDimension

DistanceDimension(DistanceValue, DistanceValue) - Constructor for class info.bioinfweb.treegraph.document.format.DistanceDimension

distancesPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.specialformats.DistanceValuesByNodeBranchDataDialog

DistanceValue - Class in info.bioinfweb.treegraph.document.format

This class represents a distance in the document.

DistanceValue() - Constructor for class info.bioinfweb.treegraph.document.format.DistanceValue

DistanceValue(float) - Constructor for class info.bioinfweb.treegraph.document.format.DistanceValue

distanceValue - Variable in class info.bioinfweb.treegraph.document.format.ScaleValue

DistanceValueInput - Class in info.bioinfweb.treegraph.gui.dialogs

DistanceValueInput(String, JPanel, int) - Constructor for class info.bioinfweb.treegraph.gui.dialogs.DistanceValueInput

DistanceValueInput(String, JPanel, int, int) - Constructor for class info.bioinfweb.treegraph.gui.dialogs.DistanceValueInput

DistanceValuePopup - Class in info.bioinfweb.treegraph.gui.mainframe.tools

Component to display a popup menu for a tool bar button.

DistanceValuePopup(Frame) - Constructor for class info.bioinfweb.treegraph.gui.mainframe.tools.DistanceValuePopup

DistanceValuesBackup - Class in info.bioinfweb.treegraph.document.undo.format

Backups all distance values specified by the constructor parameter targetAdapters including legends line widths and text heights.

DistanceValuesBackup(Tree, Node, DistanceAdapter[]) - Constructor for class info.bioinfweb.treegraph.document.undo.format.DistanceValuesBackup

DistanceValuesByNodeBranchDataAction - Class in info.bioinfweb.treegraph.gui.actions.format

DistanceValuesByNodeBranchDataAction(MainFrame) - Constructor for class info.bioinfweb.treegraph.gui.actions.format.DistanceValuesByNodeBranchDataAction

DistanceValuesByNodeBranchDataDialog - Class in info.bioinfweb.treegraph.gui.dialogs.specialformats

DistanceValuesByNodeBranchDataDialog(Frame) - Constructor for class info.bioinfweb.treegraph.gui.dialogs.specialformats.DistanceValuesByNodeBranchDataDialog

DistanceValuesByNodeBranchDataEdit - Class in info.bioinfweb.treegraph.document.undo.format

DistanceValuesByNodeBranchDataEdit(Document, NodeBranchDataAdapter, float, float, boolean, boolean, DistanceAdapter[]) - Constructor for class info.bioinfweb.treegraph.document.undo.format.DistanceValuesByNodeBranchDataEdit

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.AbstractOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.ConstantWidthOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.CornerRadiusOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.DecimalFormatOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.FontNameOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.IconFilledOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.IconOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.InternalPieChartLinesOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.LabelAboveOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.LabelHeightOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.LabelLineNumberOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.LabelLinePositionOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.LabelWidthOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.LegendPositionOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.LegendStyleOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.LineColorOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.LineWidthOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.MinLengthOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.MinSpaceAboveOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.MinSpaceBelowOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.MinTreeDistanceOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.NullPieChartLinesOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.PieColorOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.ScaleBarFormatsOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.TextColorOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.TextHeightOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.TextOrientationOperator

doApplyTo(ElementFormats) - Method in class info.bioinfweb.treegraph.document.format.operate.TextStyleOperator

Document - Class in info.bioinfweb.treegraph.document

Instances of this class contain the data for a tree and its formats as well as position-information for all TreePositioners used with this Document.

Document() - Constructor for class info.bioinfweb.treegraph.document.Document

Creates a new Instance of Document with a default name.

Document(String) - Constructor for class info.bioinfweb.treegraph.document.Document

Creates a new Instance of Document.

Document(boolean) - Constructor for class info.bioinfweb.treegraph.document.Document

document - Variable in class info.bioinfweb.treegraph.document.io.AbstractDocumentReader

document - Variable in class info.bioinfweb.treegraph.document.io.AbstractDocumentWriter

document - Variable in class info.bioinfweb.treegraph.document.undo.DocumentEdit

document - Variable in class info.bioinfweb.treegraph.document.undo.edit.LegendPaster

document - Variable in class info.bioinfweb.treegraph.graphics.positionpaint.RectangularCladogramPainter

document - Variable in class info.bioinfweb.treegraph.graphics.positionpaint.RectangularCladogramPositioner

document - Variable in class info.bioinfweb.treegraph.gui.dialogs.EditDialog

document - Variable in class info.bioinfweb.treegraph.gui.treeframe.DocumentTableModel

document - Variable in class info.bioinfweb.treegraph.gui.treeframe.TreeInternalFrame

document - Variable in class info.bioinfweb.treegraph.gui.treeframe.TreeViewPanel

DocumentAction - Class in info.bioinfweb.treegraph.gui.actions

Implements basic functionality for all actions in TreeGraph 2 which are applied on opened documents.

DocumentAction(MainFrame) - Constructor for class info.bioinfweb.treegraph.gui.actions.DocumentAction

DocumentChangeEvent - Class in info.bioinfweb.treegraph.document

Event that indicates all types of changes in TreeGraph 2 document.

DocumentChangeEvent(Document) - Constructor for class info.bioinfweb.treegraph.document.DocumentChangeEvent

DocumentEdit - Class in info.bioinfweb.treegraph.document.undo

DocumentEdit(Document) - Constructor for class info.bioinfweb.treegraph.document.undo.DocumentEdit

DocumentFilter - Interface in info.bioinfweb.treegraph.document.io

Extended interface for file filters used with JFileChooser.

DocumentListener - Interface in info.bioinfweb.treegraph.document

Classes implementing this interface can listen to changes made in a TreeGraph 2 document.

documentMargin - Variable in class info.bioinfweb.treegraph.document.format.GlobalFormats

documentMarginInput - Variable in class info.bioinfweb.treegraph.gui.dialogs.GlobalFormatsDialog

documentPanel - Variable in class info.bioinfweb.treegraph.gui.dialogs.GlobalFormatsDialog

DocumentReader - Interface in info.bioinfweb.treegraph.document.io

Classes that are able to read tree documents should implement this interface.

documentSplitPane - Variable in class info.bioinfweb.treegraph.gui.treeframe.TreeInternalFrame

DocumentTableModel - Class in info.bioinfweb.treegraph.gui.treeframe

Table modes to display the node/branch data of a document in a JTable.

DocumentTableModel(Document) - Constructor for class info.bioinfweb.treegraph.gui.treeframe.DocumentTableModel

Creates a new DocumentTableModel which shows the tree contained in document.

DocumentWriter - Interface in info.bioinfweb.treegraph.document.io

doubleClick(MouseEvent, ConcretePaintableElement) - Method in class info.bioinfweb.treegraph.gui.treeframe.TreeEditlInputListener

down - Variable in class info.bioinfweb.treegraph.document.undo.edit.LadderizeEdit

down - Variable in class info.bioinfweb.treegraph.document.undo.edit.MoveSubtreeEdit

down - Variable in class info.bioinfweb.treegraph.gui.actions.edit.LadderizeAction

downButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.io.ExportTableDialog

DOWNLOAD_URL - Static variable in class info.bioinfweb.treegraph.Main

downRadioButton - Variable in class info.bioinfweb.treegraph.gui.dialogs.elementformats.LegendPanel

downwards - Variable in class info.bioinfweb.treegraph.document.undo.file.addsupportvalues.NodeInfo